Despite the developments in conventional PCR, the complexity of multiplex real-time PCR is still limited due to the lack of sufficient detection channels. To achieve high-end multiplexing capacity on standard real-time PCR machines, PathoFinder® has developed the SmartFinder® technology. It enables Single-tube Multiplex Amplification in Real-Time (SMART) of up to 24 infectious pathogens with the same sensitivity as monoplex real-time PCR.
The detection of the amplified FAM labelled probes is by melting curve analysis on a real-time PCR system. Twelve detection probes, either ROX or Cy5 labelled and varying in melting temperature, enable specific detection of the amplified product and the corresponding pathogen.
(24 pathogens causing respiratory infections)
including SARS-CoV-2 and MERS
Viruses
•Influenza A
•Influenza B
•Influenza A(H1N1)pdm09
•RSV-A
•RSV-B
•Human Metapneumovirus
•Rhinovirus/Enterovirus
•Adenovirus
•Parainfluenza-1
•Parainfluenza-2
•Parainfluenza-3
•Parainfluenza-4
•Bocavirus
•Coronavirus NL63/HKU1
•Coronavirus OC43
•Coronavirus 229E
•SARS-CoV-2
•MERS CoV
Bacteria
•Mycoplasma pneumoniae
•Chlamydophila pneumoniae
•Legionella pneumophila
•Bordetella pertussis
(18 pathogens causing gastro-intestinal infections)
Bacteria
•Campylobacter spp.
•Salmonella spp.
•Yersinia enterocolitica
•Clostridium difficile toxin A
•Clostridium difficile toxin B
•Shiga toxin producing E. coli (STEC), stx1/stx2
•Enteropathogenic E. coli (EPEC), eae
•Enterotoxigenic E. coli (ETEC), elt/est
•Shigella/enteroinvasive E. coli (EIEC), ipaH
Parasites
•Entamoeba histolytica
•Giardia lamblia
•Cryptosporidium spp.
•Dientamoeba fragilis
Viruses
•Norovirus (GI/GII/GIV)
•Rotavirus (A)
•Adenovirus (40/41)
•Astrovirus
•Sapovirus (GI/GII/GIV/GV)
(22 pathogens causing CNS infections)
Bacteria
•Listeria monocytogenes
•Staphylococcus aureus
•Haemophilus influenzae
•Streptococcus pneumoniae
•Streptococcus agalactiae
•Neisseria meningitidis
•Borrelia burgdorferi sensu lato/ Borrelia miyamotoi
•Escherichia coli K1
Fungi
•Cryptococcus gattii sensu lato
•Cryptococcus neoformans sensu lato
Viruses
•Herpes Simplex virus type 1
•Herpes Simplex virus type 2
•Varicella-zoster virus (VZV)
•Epstein-Barr Virus (EBV)
•Cytomegalovirus (CMV)
•Human herpesvirus 6
•Human herpesvirus 7
•Human herpesvirus 8
•Human enterovirus
•Parechovirus
•Mumps virus
•Measles virus
(8 most important pathogens causing STD’s)
Bacteria
•Chlamydia trachomatis
•Chlamydia trachomatis LGV variant
•Neisseria gonorrhoeae
•Neisseria gonorrhoeae mosaic penA gene (Cephalosporin resistant, superbug status)
•Treponema pallidum
•Ureaplasma urealyticum
•Mycoplasma genitalium
Viruses
•Herpes simplex virus type 1
•Herpes simplex virus type 2
Parasites
•Trichomonas vaginalis